proteing plus Search Results


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Vakzine Projekt Management GmbH klebsiella pneumoniae
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Promega tobacco etch virus (tev) protease
( a ) Schematic of sample preparation. Dicer was constructed with Flag, <t>TEV</t> and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. <t>Dicer</t> <t>proteins</t> were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.
Tobacco Etch Virus (Tev) Protease, supplied by Promega, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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96
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( a ) Schematic of sample preparation. Dicer was constructed with Flag, <t>TEV</t> and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. <t>Dicer</t> <t>proteins</t> were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.
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Promega protev plus 20200703
( a ) Schematic of sample preparation. Dicer was constructed with Flag, <t>TEV</t> and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. <t>Dicer</t> <t>proteins</t> were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.
Protev Plus 20200703, supplied by Promega, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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86
Impeto Medical Inc two arm randomized design comparing dbt plus dm
( a ) Schematic of sample preparation. Dicer was constructed with Flag, <t>TEV</t> and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. <t>Dicer</t> <t>proteins</t> were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.
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Image Search Results


( a ) Schematic of sample preparation. Dicer was constructed with Flag, TEV and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. Dicer proteins were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.

Journal: Nature Communications

Article Title: TRBP ensures efficient Dicer processing of precursor microRNA in RNA-crowded environments

doi: 10.1038/ncomms13694

Figure Lengend Snippet: ( a ) Schematic of sample preparation. Dicer was constructed with Flag, TEV and AP tags, which were used for immunoprecipitation, elution and biotinylation, respectively. Dicer proteins were biotinylated in HEK 293 cells. The proteins were immunoprecipitated using Flag-antibody beads. The proteins were eluted out of the beads via TEV cleavage. ( b ) Western blotting of Dicer IPs. Dicer proteins were expressed without and with Myc-TRBP and were pulled down using Flag beads (left). In vitro cleavage of pre-let-7a-1 3′2nt (right). Mock is a negative control with Flag-mCherry IPs. ( c ) Schematic of single-molecule immobilization. Dicer IPs were conjugated to a polymer-coated surface via NeutrAvidin–biotin interaction. Contaminant proteins were washed away before 200 pM Cy5-labelled pre-let-7a-1 3′2nt was introduced. Interactions between the surface-immobilized Dicer complexes with Cy5-labelled pre-miRNA were visualized through total internal reflection fluorescence (TIRF) microscopy. Dots in the CCD (charge-coupled device) image reflect docking of pre-let-7a-1 3′2nt to individual Dicer complexes. The CCD image illustrated the binding events over 25 × 25 μm 2 field of view. Scale bar, 5 μm. ( d ) The CCD images in the left illustrate the stable docking of Cy-5-labelled pre-let-7a-1 3′2nt to surface-immobilized Dicer complexes in absence (upper panels) and presence of 1 μM competitor tRNA (bottom panels). The histogram in the right quantifies the inhibition of the pre-miRNA-binding activity due to the presence of 1 μM competitor tRNA. Error is the s.d. obtained from 10 different fields of view in three independent experiments. Scale bar, 5 μm.

Article Snippet: For the tandem purification, proteins were eluted out of the beads by site-specific cleavage with tobacco etch virus (TEV) protease (0.05 U μl −1 ; ProTEV Plus, Promega) at 30 °C for 90 min.

Techniques: Sample Prep, Construct, Immunoprecipitation, Western Blot, In Vitro, Negative Control, Polymer, Fluorescence, Microscopy, Binding Assay, Inhibition, Activity Assay